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- 01H5HR9BRJF5RXHSRVVEAYN0RH classification A1.
- 01H5HR9BRJF5RXHSRVVEAYN0RH date "2023".
- 01H5HR9BRJF5RXHSRVVEAYN0RH language "eng".
- 01H5HR9BRJF5RXHSRVVEAYN0RH type journalArticle.
- 01H5HR9BRJF5RXHSRVVEAYN0RH hasPart 01H5HRNQDGNAP5DC24N0Q36894.pdf.
- 01H5HR9BRJF5RXHSRVVEAYN0RH hasPart 01H5HRP6SSCPAECPF62KH2AB4Y.xlsx.
- 01H5HR9BRJF5RXHSRVVEAYN0RH hasPart 01H5HS47YTWAPJTRJFV6ZSHVS6.pdf.
- 01H5HR9BRJF5RXHSRVVEAYN0RH hasPart urn:uuid:4e861c04-de13-4e06-87ee-ac8b02cfc761.
- 01H5HR9BRJF5RXHSRVVEAYN0RH subject "Biology and Life Sciences".
- 01H5HR9BRJF5RXHSRVVEAYN0RH doi "10.1093/molbev/msad141".
- 01H5HR9BRJF5RXHSRVVEAYN0RH issn "0737-4038".
- 01H5HR9BRJF5RXHSRVVEAYN0RH issn "1537-1719".
- 01H5HR9BRJF5RXHSRVVEAYN0RH issue "7".
- 01H5HR9BRJF5RXHSRVVEAYN0RH volume "40".
- 01H5HR9BRJF5RXHSRVVEAYN0RH abstract "Angiosperms have a complex history of whole-genome duplications (WGDs), with varying numbers and ages of WGD events across clades. These WGDs have greatly affected the composition of plant genomes due to the biased retention of genes belonging to certain functional categories following their duplication. In particular, regulatory genes and genes encoding proteins that act in multiprotein complexes have been retained in excess following WGD. Here, we inferred protein-protein interaction (PPI) networks and gene regulatory networks (GRNs) for seven well-characterized angiosperm species and explored the impact of both WGD and small-scale duplications (SSDs) in network topology by analyzing changes in frequency of network motifs. We found that PPI networks are enriched in WGD-derived genes associated with dosage-sensitive intricate systems, and strong selection pressures constrain the divergence of WGD-derived genes at the sequence and PPI levels. WGD-derived genes in network motifs are mostly associated with dosage-sensitive processes, such as regulation of transcription and cell cycle, translation, photosynthesis, and carbon metabolism, whereas SSD-derived genes in motifs are associated with response to biotic and abiotic stress. Recent polyploids have higher motif frequencies than ancient polyploids, whereas WGD-derived network motifs tend to be disrupted on the longer term. Our findings demonstrate that both WGD and SSD have contributed to the evolution of angiosperm GRNs, but in different ways, with WGD events likely having a more significant impact on the short-term evolution of polyploids.".
- 01H5HR9BRJF5RXHSRVVEAYN0RH author F5A2BFFE-F0ED-11E1-A9DE-61C894A0A6B4.
- 01H5HR9BRJF5RXHSRVVEAYN0RH author ad0664ed-82e9-11ec-ba1f-eeeae3cab260.
- 01H5HR9BRJF5RXHSRVVEAYN0RH dateCreated "2023-07-17T11:03:07Z".
- 01H5HR9BRJF5RXHSRVVEAYN0RH dateModified "2024-12-12T17:56:38Z".
- 01H5HR9BRJF5RXHSRVVEAYN0RH editor urn:uuid:ba62b315-83ae-46e5-ab84-420947e58eb1.
- 01H5HR9BRJF5RXHSRVVEAYN0RH name "Whole-genome duplications and the long-term evolution of gene regulatory networks in angiosperms".
- 01H5HR9BRJF5RXHSRVVEAYN0RH pagination urn:uuid:9a9bbe3f-f36f-4ade-bbc4-f5dc110d349c.
- 01H5HR9BRJF5RXHSRVVEAYN0RH sameAs LU-01H5HR9BRJF5RXHSRVVEAYN0RH.
- 01H5HR9BRJF5RXHSRVVEAYN0RH sourceOrganization urn:uuid:0a2c9112-90b3-4c12-b520-033bc107b95f.
- 01H5HR9BRJF5RXHSRVVEAYN0RH sourceOrganization urn:uuid:0f6b7bc8-f6f2-4357-8a06-5aa4ea85360f.
- 01H5HR9BRJF5RXHSRVVEAYN0RH type A1.