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- CheShift abstract "CheShift-2 is an online application created to validate protein structures. It is based on quantum mechanics computations of 13Cα and 13Cβchemical shift as a function of the torsional angles (φ, ψ, ω and χ1, χ2) of the 20 amino acids.CheShift-2 can return a list of theoretical chemical shift values based on a PDB file. It also can display a 3D protein model based on an uploaded PDB file and chemical shift values. The 3D protein model is colored using a five color code indicating the difference of the theoretical vs the observed chemical shifts values. The differences between observed and predicted 13Cα and 13Cβ chemical shifts can be used as a sensitive probe with which to detect possible local flaws in protein structures. If both 13Cα and 13Cβ observed chemical shifts are provided CheShift-2 will attempt to provide a list of alternative χ1 and χ2 side-chain torsional angles that will reduce the differences between observed and computed chemical shifts, these values can be used to repair flaws in protein structures.CheShift-2 can be accessed using any modern web browser at http://www.cheshift.com, or via a PyMOL plugin".
- CheShift genre Bioinformatics.
- CheShift language English_language.
- CheShift latestReleaseDate "2013-09-01".
- CheShift latestReleaseVersion "3.0".
- CheShift operatingSystem Cross-platform.
- CheShift programmingLanguage HTML.
- CheShift programmingLanguage Python_(programming_language).
- CheShift thumbnail Cheshift-2_screenshot.png?width=300.
- CheShift wikiPageExternalLink cheshift.com.
- CheShift wikiPageExternalLink psvs-1_4-dev.nesg.org.
- CheShift wikiPageExternalLink Cheshift.
- CheShift wikiPageExternalLink www.cheshift.com.
- CheShift wikiPageExternalLink PROCHECK.
- CheShift wikiPageExternalLink Cheshift.
- CheShift wikiPageID "35585549".
- CheShift wikiPageRevisionID "601713968".
- CheShift genre "Bioinformatics online app".
- CheShift hasPhotoCollection CheShift.
- CheShift language English_language.
- CheShift latestReleaseDate "2013-09-01".
- CheShift latestReleaseVersion "3".
- CheShift license "Free of charge for academic use".
- CheShift name "CheShift-2".
- CheShift operatingSystem Cross-platform.
- CheShift programmingLanguage HTML.
- CheShift programmingLanguage Python_(programming_language).
- CheShift screenshot "250".
- CheShift subject Category:Bioinformatics_software.
- CheShift type Abstraction100002137.
- CheShift type Code106355894.
- CheShift type CodingSystem106353757.
- CheShift type Communication100033020.
- CheShift type Software106566077.
- CheShift type Writing106359877.
- CheShift type WrittenCommunication106349220.
- CheShift type Software.
- CheShift type Work.
- CheShift type CreativeWork.
- CheShift type InformationEntity.
- CheShift comment "CheShift-2 is an online application created to validate protein structures. It is based on quantum mechanics computations of 13Cα and 13Cβchemical shift as a function of the torsional angles (φ, ψ, ω and χ1, χ2) of the 20 amino acids.CheShift-2 can return a list of theoretical chemical shift values based on a PDB file. It also can display a 3D protein model based on an uploaded PDB file and chemical shift values.".
- CheShift label "CheShift".
- CheShift sameAs m.0jkxwny.
- CheShift sameAs Q5088744.
- CheShift sameAs Q5088744.
- CheShift sameAs CheShift.
- CheShift wasDerivedFrom CheShift?oldid=601713968.
- CheShift depiction Cheshift-2_screenshot.png.
- CheShift homepage cheshift.com.
- CheShift isPrimaryTopicOf CheShift.
- CheShift name "CheShift-2".