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- Integrated_Microbial_Genomes_System abstract "The Integrated Microbial Genomes (IMG) system is a genome browsing and annotation platform developed by the U.S. Department of Energy (DOE)-Joint Genome Institute. IMG contains all the draft and complete microbial genomes sequenced by the DOE-JGI integrated with other publicly available genomes (including Archaea, Bacteria, Eukarya, Viruses and Plasmids). IMG provides users a set of tools for comparative analysis of microbial genomes along three dimensions: genes, genomes and functions. Users can select and transfer them in the comparative analysis carts based upon a variety of criteria. IMG also includes a genome annotation pipeline that integrates information from several tools, including KEGG, Pfam, InterPro, and the Gene Ontology, among others. Users can also type or upload their own gene annotations (called MyIMG gene annotations) and the IMG system will allow them to generate Genbank or EMBL format files containing these annotations.In successive releases IMG has expanded to include several domain-specific tools. The Integrated Microbial Genomes with Microbiome Samples (IMG/M) system is an extension of the IMG system providing a comparative analysis context of metagenomic data with the publicly available isolate genomes. The Integrated Microbial Genomes- Expert Review (IMG/ER) system provides support to individual scientists or group of scientists for functional annotation and curation of their microbial genomes of interest. Users can submit their annotated genomes (or request the IMG automated annotation pipeline to be applied first) into IMG-ER and proceed with manual curation and comparative analysis in the system, through secure (password protected) access. The IMG-HMP is focused on analysis of genomes related to the Human Microbiome Project (HMP) in the context of all publicly available genomes in IMG.".
- Integrated_Microbial_Genomes_System thumbnail Integrated_microbial_genomes.jpg?width=300.
- Integrated_Microbial_Genomes_System title "IMG".
- Integrated_Microbial_Genomes_System wikiPageExternalLink MicrobesOnline.org.
- Integrated_Microbial_Genomes_System wikiPageExternalLink cmr.jcvi.org.
- Integrated_Microbial_Genomes_System wikiPageExternalLink img.jgi.doe.gov.
- Integrated_Microbial_Genomes_System wikiPageExternalLink img.jgi.doe.gov.
- Integrated_Microbial_Genomes_System wikiPageExternalLink er.
- Integrated_Microbial_Genomes_System wikiPageExternalLink m.
- Integrated_Microbial_Genomes_System wikiPageExternalLink theSeed.org.
- Integrated_Microbial_Genomes_System wikiPageExternalLink lproks.cgi.
- Integrated_Microbial_Genomes_System wikiPageID "9543833".
- Integrated_Microbial_Genomes_System wikiPageRevisionID "591801020".
- Integrated_Microbial_Genomes_System author "Victor M Markowitz".
- Integrated_Microbial_Genomes_System description "integrated microbial genomes database and comparative analysis system.".
- Integrated_Microbial_Genomes_System hasPhotoCollection Integrated_Microbial_Genomes_System.
- Integrated_Microbial_Genomes_System logo File:Integrated_microbial_genomes.jpg.
- Integrated_Microbial_Genomes_System pmid "Markowitz et al.".
- Integrated_Microbial_Genomes_System title "IMG".
- Integrated_Microbial_Genomes_System description "integrated microbial genomes database and comparative analysis system.".
- Integrated_Microbial_Genomes_System subject Category:Bioinformatics.
- Integrated_Microbial_Genomes_System subject Category:Biological_databases.
- Integrated_Microbial_Genomes_System subject Category:Genome_projects.
- Integrated_Microbial_Genomes_System type Abstraction100002137.
- Integrated_Microbial_Genomes_System type Act100030358.
- Integrated_Microbial_Genomes_System type Activity100407535.
- Integrated_Microbial_Genomes_System type Event100029378.
- Integrated_Microbial_Genomes_System type GenomeProjects.
- Integrated_Microbial_Genomes_System type PsychologicalFeature100023100.
- Integrated_Microbial_Genomes_System type Undertaking100795720.
- Integrated_Microbial_Genomes_System type Work100575741.
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- Integrated_Microbial_Genomes_System type Database.
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- Integrated_Microbial_Genomes_System comment "The Integrated Microbial Genomes (IMG) system is a genome browsing and annotation platform developed by the U.S. Department of Energy (DOE)-Joint Genome Institute. IMG contains all the draft and complete microbial genomes sequenced by the DOE-JGI integrated with other publicly available genomes (including Archaea, Bacteria, Eukarya, Viruses and Plasmids). IMG provides users a set of tools for comparative analysis of microbial genomes along three dimensions: genes, genomes and functions.".
- Integrated_Microbial_Genomes_System label "Integrated Microbial Genomes System".
- Integrated_Microbial_Genomes_System label "Integrated Microbial Genomes System".
- Integrated_Microbial_Genomes_System sameAs Integrated_Microbial_Genomes_System.
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- Integrated_Microbial_Genomes_System depiction Integrated_microbial_genomes.jpg.
- Integrated_Microbial_Genomes_System homepage img.jgi.doe.gov.
- Integrated_Microbial_Genomes_System isPrimaryTopicOf Integrated_Microbial_Genomes_System.